Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 AC104794.3-201ENST00000566840 1248 ntBASIC20.4■□□□□ 0.86
SNED1Q8TER0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 AP001350.2-201ENST00000625104 1094 ntBASIC20.4■□□□□ 0.86
SNED1Q8TER0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 DGCR5-201ENST00000399539 862 ntBASIC20.39■□□□□ 0.85
SNED1Q8TER0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.39■□□□□ 0.85
SNED1Q8TER0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 SPDYE18-201ENST00000510091 1050 ntBASIC20.39■□□□□ 0.85
SNED1Q8TER0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SNED1Q8TER0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNED1Q8TER0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 KRT18P34-201ENST00000488218 1270 ntBASIC20.38■□□□□ 0.85
SNED1Q8TER0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 CETN4P-206ENST00000642099 2168 ntBASIC20.38■□□□□ 0.85
SNED1Q8TER0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.38■□□□□ 0.85
SNED1Q8TER0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNED1Q8TER0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 AC073439.1-201ENST00000624121 1774 ntBASIC20.37■□□□□ 0.85
SNED1Q8TER0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 AL353779.1-201ENST00000434793 351 ntBASIC20.37■□□□□ 0.85
SNED1Q8TER0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 INE1-201ENST00000456273 945 ntBASIC20.37■□□□□ 0.85
SNED1Q8TER0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms