Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 AL512791.2-201ENST00000615251 4609 ntBASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 KRT8P8-201ENST00000434750 1448 ntBASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 AC010327.5-201ENST00000586923 3061 ntBASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 MCRIP2P1-201ENST00000394346 511 ntBASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 AL591742.1-201ENST00000604433 565 ntBASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 HEIH-201ENST00000623091 1652 ntBASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SPTSSBQ8NFR3 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms