Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 IGLL3P-201ENST00000412472 434 ntBASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 LINC01451-201ENST00000623792 534 ntBASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 AC010507.1-201ENST00000633895 436 ntBASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 BCAR1-209ENST00000546196 1340 ntBASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC155Q8N6L0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AC097637.2-201ENST00000624096 1997 ntBASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 MYCLP1-201ENST00000372451 1075 ntBASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AC004877.2-201ENST00000623941 599 ntBASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AC007064.4-201ENST00000637740 555 ntBASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 AC009336.1-201ENST00000608941 1553 ntBASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC155Q8N6L0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 AD000864.1-201ENST00000624076 2295 ntBASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 PTCHD3P3-201ENST00000403073 906 ntBASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 LYSMD4-203ENST00000378904 2122 ntBASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC155Q8N6L0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC155Q8N6L0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms