Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC23.7■■□□□ 1.38
UBR1Q8IWV7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
UBR1Q8IWV7 BX323043.1-201ENST00000641006 1765 ntBASIC23.7■■□□□ 1.38
UBR1Q8IWV7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
UBR1Q8IWV7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AL133338.1-201ENST00000565695 1517 ntBASIC23.69■■□□□ 1.38
UBR1Q8IWV7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 AC133552.6-201ENST00000613406 534 ntBASIC23.69■■□□□ 1.38
UBR1Q8IWV7 SLC25A24-204ENST00000569674 2357 ntBASIC23.69■■□□□ 1.38
UBR1Q8IWV7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.69■■□□□ 1.38
UBR1Q8IWV7 ABALON-201ENST00000629058 1903 ntBASIC23.68■■□□□ 1.38
UBR1Q8IWV7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 AC010319.3-201ENST00000597028 470 ntBASIC23.68■■□□□ 1.38
UBR1Q8IWV7 AC084346.2-201ENST00000607097 949 ntBASIC23.68■■□□□ 1.38
UBR1Q8IWV7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBR1Q8IWV7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AL391069.4-201ENST00000609583 481 ntBASIC23.67■■□□□ 1.38
UBR1Q8IWV7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AL033527.5-202ENST00000641632 1098 ntBASIC23.67■■□□□ 1.38
UBR1Q8IWV7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 SNX33P1-201ENST00000592116 1762 ntBASIC23.67■■□□□ 1.38
UBR1Q8IWV7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AC093724.1-201ENST00000448659 1027 ntBASIC23.67■■□□□ 1.38
UBR1Q8IWV7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 MIR4538-201ENST00000581377 78 ntBASIC23.67■■□□□ 1.38
UBR1Q8IWV7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC23.67■■□□□ 1.38
UBR1Q8IWV7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 AC015936.2-201ENST00000593177 259 ntBASIC23.66■■□□□ 1.38
UBR1Q8IWV7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 AC009113.1-201ENST00000570267 2443 ntBASIC23.66■■□□□ 1.38
UBR1Q8IWV7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBR1Q8IWV7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms