Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 AL627223.1-201ENST00000416693 442 ntBASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 AL161645.1-201ENST00000622716 1255 ntBASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE3BQ7Z3V4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AC023141.5-201ENST00000458585 616 ntBASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 RN7SL589P-201ENST00000481268 310 ntBASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 RFPL4AP1-201ENST00000530883 850 ntBASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AP001350.2-201ENST00000625104 1094 ntBASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE3BQ7Z3V4 AKAP8P1-201ENST00000434743 1349 ntBASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 HMGN1P19-201ENST00000436976 333 ntBASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 AL592309.1-201ENST00000443127 649 ntBASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 AL645608.8-201ENST00000606034 2086 ntBASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE3BQ7Z3V4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms