Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 SPDYE7P-202ENST00000420373 878 ntBASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 MIR3909-201ENST00000579518 119 ntBASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 WASH6P-202ENST00000359512 1437 ntBASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC149Q6ZUS6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC149Q6ZUS6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AC093525.9-201ENST00000624961 1746 ntBASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 FAM207CP-201ENST00000443486 507 ntBASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AL031055.1-201ENST00000606362 631 ntBASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AL390754.1-201ENST00000619088 582 ntBASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 FO538757.1-201ENST00000623083 1397 ntBASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC149Q6ZUS6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 RNU1-129P-201ENST00000384064 167 ntBASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 TREML5P-201ENST00000421694 576 ntBASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms