Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH1Q08174 AC073621.1-201ENST00000392730 636 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 PTCHD3P3-201ENST00000403073 906 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 DUSP5P1-201ENST00000441325 1139 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDH1Q08174 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 REXO1L3P-201ENST00000622202 1288 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH1Q08174 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH1Q08174 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH1Q08174 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH1Q08174 RNF216P1-203ENST00000404404 2427 ntBASIC16.38■□□□□ 0.21
PCDH1Q08174 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PCDH1Q08174 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH1Q08174 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH1Q08174 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH1Q08174 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH1Q08174 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 HLA-J-202ENST00000469281 1241 ntBASIC16.37■□□□□ 0.21
PCDH1Q08174 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.37■□□□□ 0.21
PCDH1Q08174 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH1Q08174 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDH1Q08174 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH1Q08174 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH1Q08174 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDH1Q08174 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AC006504.4-201ENST00000592118 1568 ntBASIC16.36■□□□□ 0.21
PCDH1Q08174 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH1Q08174 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AC018712.1-201ENST00000455767 687 ntBASIC16.36■□□□□ 0.21
PCDH1Q08174 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.36■□□□□ 0.21
PCDH1Q08174 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 AL121912.1-201ENST00000603683 238 ntBASIC16.36■□□□□ 0.21
PCDH1Q08174 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH1Q08174 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH1Q08174 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH1Q08174 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms