Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.55■□□□□ 0.4
COPAP53621 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 PRSS29P-201ENST00000440800 595 ntBASIC17.55■□□□□ 0.4
COPAP53621 HCG4B-203ENST00000450128 991 ntBASIC17.55■□□□□ 0.4
COPAP53621 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.55■□□□□ 0.4
COPAP53621 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.55■□□□□ 0.4
COPAP53621 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 AL353135.1-201ENST00000606729 504 ntBASIC17.55■□□□□ 0.4
COPAP53621 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
COPAP53621 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.55■□□□□ 0.4
COPAP53621 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 MYCLP1-201ENST00000372451 1075 ntBASIC17.54■□□□□ 0.4
COPAP53621 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 PTCHD3P3-201ENST00000403073 906 ntBASIC17.54■□□□□ 0.4
COPAP53621 LINC00982-205ENST00000420957 435 ntBASIC17.54■□□□□ 0.4
COPAP53621 MCCD1P2-201ENST00000423228 335 ntBASIC17.54■□□□□ 0.4
COPAP53621 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 AC004967.1-201ENST00000453589 447 ntBASIC17.54■□□□□ 0.4
COPAP53621 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.54■□□□□ 0.4
COPAP53621 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.54■□□□□ 0.4
COPAP53621 AP001160.2-201ENST00000596071 487 ntBASIC17.54■□□□□ 0.4
COPAP53621 AC092865.6-201ENST00000642101 219 ntBASIC17.54■□□□□ 0.4
COPAP53621 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 CROCCP2-202ENST00000412962 2773 ntBASIC17.54■□□□□ 0.4
COPAP53621 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COPAP53621 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPAP53621 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.54■□□□□ 0.4
COPAP53621 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COPAP53621 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
COPAP53621 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COPAP53621 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.53■□□□□ 0.4
COPAP53621 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COPAP53621 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.53■□□□□ 0.4
COPAP53621 AC018845.2-201ENST00000568326 409 ntBASIC17.53■□□□□ 0.4
COPAP53621 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
COPAP53621 AC134684.3-201ENST00000641758 218 ntBASIC17.53■□□□□ 0.4
COPAP53621 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
COPAP53621 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
COPAP53621 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPAP53621 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms