Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A3P43003 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC1A3P43003 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC1A3P43003 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC1A3P43003 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A3P43003 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A3P43003 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.64■□□□□ 0.1
SLC1A3P43003 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC1A3P43003 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A3P43003 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A3P43003 SAPCD2P3-201ENST00000455031 850 ntBASIC15.64■□□□□ 0.09
SLC1A3P43003 SCARNA2-201ENST00000458748 420 ntBASIC15.64■□□□□ 0.09
SLC1A3P43003 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 AC008608.2-201ENST00000606089 416 ntBASIC15.64■□□□□ 0.09
SLC1A3P43003 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A3P43003 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A3P43003 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A3P43003 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC1A3P43003 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A3P43003 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC1A3P43003 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SLC1A3P43003 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SLC1A3P43003 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A3P43003 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A3P43003 NCF1C-201ENST00000438382 1427 ntBASIC15.63■□□□□ 0.09
SLC1A3P43003 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A3P43003 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A3P43003 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A3P43003 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms