Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.3■□□□□ 0.2
PTX3P26022 AC006557.2-201ENST00000592985 1240 ntBASIC16.3■□□□□ 0.2
PTX3P26022 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 AC107918.4-202ENST00000641623 219 ntBASIC16.3■□□□□ 0.2
PTX3P26022 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PTX3P26022 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.29■□□□□ 0.2
PTX3P26022 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.29■□□□□ 0.2
PTX3P26022 DUSP5P1-201ENST00000441325 1139 ntBASIC16.29■□□□□ 0.2
PTX3P26022 EMBP1-201ENST00000458200 901 ntBASIC16.29■□□□□ 0.2
PTX3P26022 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.29■□□□□ 0.2
PTX3P26022 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.29■□□□□ 0.2
PTX3P26022 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.29■□□□□ 0.2
PTX3P26022 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.29■□□□□ 0.2
PTX3P26022 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PTX3P26022 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
PTX3P26022 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTX3P26022 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 AGGF1P2-201ENST00000426656 2106 ntBASIC16.28■□□□□ 0.2
PTX3P26022 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 PCDHB17P-201ENST00000539533 2393 ntBASIC16.28■□□□□ 0.2
PTX3P26022 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
PTX3P26022 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.28■□□□□ 0.2
PTX3P26022 RNPS1P1-201ENST00000507437 918 ntBASIC16.28■□□□□ 0.2
PTX3P26022 OR7E14P-202ENST00000530490 1290 ntBASIC16.28■□□□□ 0.2
PTX3P26022 DUX4L17-201ENST00000557360 1267 ntBASIC16.28■□□□□ 0.2
PTX3P26022 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.28■□□□□ 0.2
PTX3P26022 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTX3P26022 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 AL121912.1-201ENST00000603683 238 ntBASIC16.28■□□□□ 0.2
PTX3P26022 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.28■□□□□ 0.2
PTX3P26022 AF228730.7-201ENST00000641842 219 ntBASIC16.28■□□□□ 0.2
PTX3P26022 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTX3P26022 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
PTX3P26022 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTX3P26022 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTX3P26022 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
PTX3P26022 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.28■□□□□ 0.2
PTX3P26022 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PTX3P26022 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms