Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP24386 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP24386 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP24386 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP24386 AC078925.2-201ENST00000624013 1973 ntBASIC15.93■□□□□ 0.14
CHMP24386 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP24386 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 CROCCP1-201ENST00000426910 5675 ntBASIC15.92■□□□□ 0.14
CHMP24386 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.92■□□□□ 0.14
CHMP24386 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.92■□□□□ 0.14
CHMP24386 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP24386 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.92■□□□□ 0.14
CHMP24386 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 AD001527.2-201ENST00000622994 785 ntBASIC15.92■□□□□ 0.14
CHMP24386 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP24386 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP24386 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP24386 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 AC092171.3-201ENST00000610122 2651 ntBASIC15.91■□□□□ 0.14
CHMP24386 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 FGFR3P6-201ENST00000457012 610 ntBASIC15.91■□□□□ 0.14
CHMP24386 AP002469.2-201ENST00000531724 424 ntBASIC15.91■□□□□ 0.14
CHMP24386 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 PMPCAP1-201ENST00000508114 1576 ntBASIC15.91■□□□□ 0.14
CHMP24386 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CHMP24386 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP24386 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP24386 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.9■□□□□ 0.14
CHMP24386 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP24386 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.9■□□□□ 0.14
CHMP24386 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP24386 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms