Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRFP10586 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRFP10586 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRFP10586 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRFP10586 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPRFP10586 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 AC087499.5-201ENST00000452760 1342 ntBASIC19.2■□□□□ 0.66
PTPRFP10586 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTPRFP10586 PKD1P6-201ENST00000343738 4769 ntBASIC19.2■□□□□ 0.66
PTPRFP10586 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPRFP10586 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPRFP10586 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.2■□□□□ 0.66
PTPRFP10586 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPRFP10586 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 NME2P1-201ENST00000426182 414 ntBASIC19.2■□□□□ 0.66
PTPRFP10586 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPRFP10586 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 AC134043.2-201ENST00000624206 2238 ntBASIC19.2■□□□□ 0.66
PTPRFP10586 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRFP10586 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPRFP10586 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPRFP10586 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPRFP10586 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPRFP10586 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 DGCR5-201ENST00000399539 862 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPRFP10586 AC007431.3-201ENST00000623221 587 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPRFP10586 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPRFP10586 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPRFP10586 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
PTPRFP10586 MPDU1-223ENST00000582151 728 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AC013467.2-201ENST00000605472 835 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPRFP10586 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPRFP10586 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPRFP10586 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 AL035456.1-201ENST00000456064 1369 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 NOC2LP1-202ENST00000452600 2235 ntBASIC19.19■□□□□ 0.66
PTPRFP10586 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPRFP10586 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPRFP10586 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPRFP10586 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 RN7SL837P-201ENST00000463010 287 ntBASIC19.18■□□□□ 0.66
PTPRFP10586 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPRFP10586 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPRFP10586 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPRFP10586 TP53TG3HP-202ENST00000569755 579 ntBASIC19.18■□□□□ 0.66
PTPRFP10586 AC061975.2-201ENST00000581722 295 ntBASIC19.18■□□□□ 0.66
PTPRFP10586 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPRFP10586 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 MIR6752-201ENST00000618442 71 ntBASIC19.18■□□□□ 0.66
PTPRFP10586 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 AL391825.1-201ENST00000457671 1364 ntBASIC19.18■□□□□ 0.66
PTPRFP10586 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPRFP10586 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPRFP10586 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms