Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TSPAN3O60637 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 FAM58CP-201ENST00000435741 640 ntBASIC17.48■□□□□ 0.39
TSPAN3O60637 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TSPAN3O60637 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.48■□□□□ 0.39
TSPAN3O60637 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.48■□□□□ 0.39
TSPAN3O60637 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.48■□□□□ 0.39
TSPAN3O60637 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.48■□□□□ 0.39
TSPAN3O60637 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 LINC02012-201ENST00000608206 1725 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.47■□□□□ 0.39
TSPAN3O60637 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TSPAN3O60637 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TSPAN3O60637 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 AC211486.1-202ENST00000416371 468 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.47■□□□□ 0.39
TSPAN3O60637 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.47■□□□□ 0.39
TSPAN3O60637 CEND1P1-201ENST00000451006 455 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 AC004967.1-201ENST00000453589 447 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 AC211476.1-201ENST00000503899 468 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
TSPAN3O60637 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.47■□□□□ 0.39
TSPAN3O60637 AL596442.2-201ENST00000610240 980 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.47■□□□□ 0.39
TSPAN3O60637 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.47■□□□□ 0.39
TSPAN3O60637 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.47■□□□□ 0.39
TSPAN3O60637 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 AL023806.1-201ENST00000603994 1649 ntBASIC17.47■□□□□ 0.39
TSPAN3O60637 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
TSPAN3O60637 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN3O60637 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TSPAN3O60637 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.46■□□□□ 0.39
TSPAN3O60637 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TSPAN3O60637 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 OR6D1P-203ENST00000641209 4860 ntBASIC17.46■□□□□ 0.39
TSPAN3O60637 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TSPAN3O60637 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.46■□□□□ 0.39
TSPAN3O60637 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.46■□□□□ 0.39
TSPAN3O60637 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.46■□□□□ 0.39
TSPAN3O60637 AP001160.2-201ENST00000596071 487 ntBASIC17.46■□□□□ 0.39
TSPAN3O60637 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
TSPAN3O60637 AC068137.2-201ENST00000605408 478 ntBASIC17.46■□□□□ 0.39
TSPAN3O60637 AC091812.2-201ENST00000619081 385 ntBASIC17.46■□□□□ 0.39
TSPAN3O60637 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.46■□□□□ 0.39
TSPAN3O60637 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSPAN3O60637 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TSPAN3O60637 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.46■□□□□ 0.38
TSPAN3O60637 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.45■□□□□ 0.38
TSPAN3O60637 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.45■□□□□ 0.38
TSPAN3O60637 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms