Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM38O00635 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM38O00635 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 UBALD1-205ENST00000590891 2641 ntBASIC17.12■□□□□ 0.33
TRIM38O00635 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM38O00635 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM38O00635 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM38O00635 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM38O00635 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM38O00635 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM38O00635 AL355385.1-201ENST00000606123 409 ntBASIC17.12■□□□□ 0.33
TRIM38O00635 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM38O00635 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRIM38O00635 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM38O00635 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 OR6D1P-203ENST00000641209 4860 ntBASIC17.12■□□□□ 0.33
TRIM38O00635 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM38O00635 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM38O00635 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM38O00635 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 AC106886.4-201ENST00000623557 2502 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 AL139384.1-201ENST00000612143 3047 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM38O00635 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM38O00635 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 AC211486.1-202ENST00000416371 468 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 MCCD1P2-201ENST00000423228 335 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM38O00635 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM38O00635 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM38O00635 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM38O00635 AC211476.1-201ENST00000503899 468 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM38O00635 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM38O00635 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM38O00635 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM38O00635 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 PCDHB19P-201ENST00000570871 2371 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 AC100803.2-201ENST00000562459 1963 ntBASIC17.11■□□□□ 0.33
TRIM38O00635 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM38O00635 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM38O00635 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM38O00635 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 CRYGEP-201ENST00000412192 528 ntBASIC17.1■□□□□ 0.33
TRIM38O00635 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 AC108073.2-201ENST00000464002 357 ntBASIC17.1■□□□□ 0.33
TRIM38O00635 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM38O00635 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM38O00635 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 AC092865.6-201ENST00000642101 219 ntBASIC17.1■□□□□ 0.33
TRIM38O00635 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms