Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 PP12613-201ENST00000424958 2230 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 MIR940-201ENST00000401276 94 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC098831.1-202ENST00000438821 336 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC002558.1-201ENST00000488906 803 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 STK25P1-201ENST00000585406 838 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ZNF259P1-201ENST00000407656 1365 ntBASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF1Q9BSM1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AP002414.3-201ENST00000589352 1468 ntBASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AC006557.2-201ENST00000592985 1240 ntBASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms