Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 AC068418.2-201ENST00000577309 3703 ntBASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 RPS2P1-201ENST00000434010 821 ntBASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 FAM197Y8-203ENST00000450145 560 ntBASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIMC1Q8NDZ2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 RNPS1P1-201ENST00000507437 918 ntBASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AL353135.1-201ENST00000606729 504 ntBASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AC005915.1-201ENST00000624912 2018 ntBASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AC106886.4-201ENST00000623557 2502 ntBASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SIMC1Q8NDZ2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms