Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 CHCHD2P8-201ENST00000429873 447 ntBASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 VENTXP7-201ENST00000475503 772 ntBASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 AC112698.1-201ENST00000510299 916 ntBASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 AC124864.1-201ENST00000623408 392 ntBASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 MTCL1P1-201ENST00000446207 792 ntBASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 TSSC2-201ENST00000450217 709 ntBASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM53Q6P2H8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC068472.1-201ENST00000474589 881 ntBASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC011840.4-201ENST00000578471 627 ntBASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC069148.1-201ENST00000608741 768 ntBASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AL592071.1-201ENST00000611956 408 ntBASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM53Q6P2H8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms