Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 AC093909.1-201ENST00000504731 1122 ntBASIC15.64■□□□□ 0.09
CLDN20P56880 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.64■□□□□ 0.09
CLDN20P56880 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN20P56880 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN20P56880 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN20P56880 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN20P56880 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN20P56880 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN20P56880 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN20P56880 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN20P56880 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
CLDN20P56880 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN20P56880 AC008735.5-201ENST00000623544 497 ntBASIC15.63■□□□□ 0.09
CLDN20P56880 AC116407.3-201ENST00000623905 1129 ntBASIC15.63■□□□□ 0.09
CLDN20P56880 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN20P56880 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLDN20P56880 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CLDN20P56880 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN20P56880 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN20P56880 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN20P56880 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN20P56880 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN20P56880 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 AC139887.3-201ENST00000568585 713 ntBASIC15.62■□□□□ 0.09
CLDN20P56880 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN20P56880 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN20P56880 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 AL589182.2-201ENST00000619332 1049 ntBASIC15.62■□□□□ 0.09
CLDN20P56880 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 AL135999.2-201ENST00000622438 1686 ntBASIC15.62■□□□□ 0.09
CLDN20P56880 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms