Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
ATXN3P54252 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 PRYP5-201ENST00000451909 266 ntBASIC17.43■□□□□ 0.38
ATXN3P54252 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.43■□□□□ 0.38
ATXN3P54252 C20orf181-201ENST00000623918 480 ntBASIC17.43■□□□□ 0.38
ATXN3P54252 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 AP001094.4-201ENST00000579008 2176 ntBASIC17.43■□□□□ 0.38
ATXN3P54252 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATXN3P54252 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.43■□□□□ 0.38
ATXN3P54252 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATXN3P54252 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 AC073621.1-201ENST00000392730 636 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 HTR5BP-201ENST00000430851 1154 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 KRT18P2-201ENST00000447938 1258 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 YBX1P5-201ENST00000509441 847 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 AP002472.1-201ENST00000577490 586 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 AC011467.4-201ENST00000594891 528 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 AL589182.2-201ENST00000619332 1049 ntBASIC17.42■□□□□ 0.38
ATXN3P54252 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
ATXN3P54252 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
ATXN3P54252 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATXN3P54252 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATXN3P54252 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.42■□□□□ 0.38
ATXN3P54252 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATXN3P54252 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 AC006116.8-202ENST00000587620 1550 ntBASIC17.41■□□□□ 0.38
ATXN3P54252 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATXN3P54252 ALG1L5P-201ENST00000482043 771 ntBASIC17.41■□□□□ 0.38
ATXN3P54252 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.41■□□□□ 0.38
ATXN3P54252 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
ATXN3P54252 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.41■□□□□ 0.38
ATXN3P54252 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms