Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HADHAP40939 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 LINC00982-205ENST00000420957 435 ntBASIC17.23■□□□□ 0.35
HADHAP40939 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.23■□□□□ 0.35
HADHAP40939 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 AL589182.2-201ENST00000619332 1049 ntBASIC17.23■□□□□ 0.35
HADHAP40939 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.23■□□□□ 0.35
HADHAP40939 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HADHAP40939 GPR89P-201ENST00000407924 1495 ntBASIC17.23■□□□□ 0.35
HADHAP40939 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.23■□□□□ 0.35
HADHAP40939 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HADHAP40939 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HADHAP40939 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.22■□□□□ 0.35
HADHAP40939 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HADHAP40939 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 UNC93B7-201ENST00000509439 705 ntBASIC17.22■□□□□ 0.35
HADHAP40939 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 SART3-203ENST00000546611 1184 ntBASIC17.22■□□□□ 0.35
HADHAP40939 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.22■□□□□ 0.35
HADHAP40939 MTDHP4-201ENST00000600287 670 ntBASIC17.22■□□□□ 0.35
HADHAP40939 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HADHAP40939 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HADHAP40939 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HADHAP40939 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.21■□□□□ 0.35
HADHAP40939 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.21■□□□□ 0.35
HADHAP40939 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
HADHAP40939 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HADHAP40939 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.21■□□□□ 0.35
HADHAP40939 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 PCDHA14-201ENST00000506751 2298 ntBASIC17.21■□□□□ 0.35
HADHAP40939 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
HADHAP40939 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
HADHAP40939 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 FAAHP1-202ENST00000446499 1238 ntBASIC17.21■□□□□ 0.35
HADHAP40939 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.21■□□□□ 0.35
HADHAP40939 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
HADHAP40939 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HADHAP40939 FLJ38576-201ENST00000623820 2459 ntBASIC17.21■□□□□ 0.34
HADHAP40939 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HADHAP40939 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.2■□□□□ 0.34
HADHAP40939 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HADHAP40939 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.2■□□□□ 0.34
HADHAP40939 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.2■□□□□ 0.34
HADHAP40939 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
HADHAP40939 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HADHAP40939 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HADHAP40939 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HADHAP40939 AC011270.2-201ENST00000624293 2550 ntBASIC17.2■□□□□ 0.34
HADHAP40939 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HADHAP40939 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms