Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC211486.1-202ENST00000416371 468 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 AC140658.5-201ENST00000438532 169 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC004967.1-201ENST00000453589 447 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 AC211476.1-201ENST00000503899 468 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC6A4P31645 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 ELL2P1-201ENST00000413990 1906 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SLC6A4P31645 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 AL121761.2-201ENST00000598007 1648 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 PCDHB17P-201ENST00000539533 2393 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 AC131009.4-201ENST00000624048 1740 ntBASIC17.38■□□□□ 0.37
SLC6A4P31645 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLC6A4P31645 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A4P31645 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 AC012313.1-201ENST00000593393 3059 ntBASIC17.37■□□□□ 0.37
SLC6A4P31645 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A4P31645 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 RPS8P6-201ENST00000426177 609 ntBASIC17.37■□□□□ 0.37
SLC6A4P31645 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC6A4P31645 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC6A4P31645 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC6A4P31645 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A4P31645 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC6A4P31645 MIR4492-201ENST00000581627 80 ntBASIC17.37■□□□□ 0.37
SLC6A4P31645 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.37■□□□□ 0.37
SLC6A4P31645 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A4P31645 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A4P31645 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A4P31645 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SLC6A4P31645 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 HCG4-201ENST00000418983 998 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A4P31645 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A4P31645 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 CEND1P1-201ENST00000451006 455 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A4P31645 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.36■□□□□ 0.37
SLC6A4P31645 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SLC6A4P31645 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms