Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 AC015922.1-201ENST00000421102 1152 ntBASIC19.07■□□□□ 0.64
COL11A1P12107 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.07■□□□□ 0.64
COL11A1P12107 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.07■□□□□ 0.64
COL11A1P12107 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL11A1P12107 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.06■□□□□ 0.64
COL11A1P12107 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 PCDHB17P-201ENST00000539533 2393 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.06■□□□□ 0.64
COL11A1P12107 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.06■□□□□ 0.64
COL11A1P12107 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.06■□□□□ 0.64
COL11A1P12107 SERBP1P5-201ENST00000510079 1181 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.06■□□□□ 0.64
COL11A1P12107 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 AC027369.6-201ENST00000525520 931 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.06■□□□□ 0.64
COL11A1P12107 TEX28P1-201ENST00000613479 1221 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 TEX28P2-201ENST00000617764 1221 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.06■□□□□ 0.64
COL11A1P12107 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL11A1P12107 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL11A1P12107 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.06■□□□□ 0.64
COL11A1P12107 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
COL11A1P12107 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.05■□□□□ 0.64
COL11A1P12107 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 BASP1P1-201ENST00000430708 665 ntBASIC19.05■□□□□ 0.64
COL11A1P12107 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.05■□□□□ 0.64
COL11A1P12107 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.05■□□□□ 0.64
COL11A1P12107 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL11A1P12107 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.05■□□□□ 0.64
COL11A1P12107 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL11A1P12107 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.05■□□□□ 0.64
COL11A1P12107 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL11A1P12107 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
COL11A1P12107 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.04■□□□□ 0.64
COL11A1P12107 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.04■□□□□ 0.64
COL11A1P12107 AC003101.2-201ENST00000612557 442 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.04■□□□□ 0.64
COL11A1P12107 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 AC060834.1-201ENST00000443027 2032 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
COL11A1P12107 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 AC141586.5-201ENST00000624546 2050 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.04■□□□□ 0.64
COL11A1P12107 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 HLA-H-201ENST00000383620 1096 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.04■□□□□ 0.64
COL11A1P12107 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms