Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFP11831 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFP11831 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.02■□□□□ 0.32
SRFP11831 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFP11831 MIR1909-201ENST00000411312 80 ntBASIC17.02■□□□□ 0.32
SRFP11831 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.02■□□□□ 0.32
SRFP11831 GNAQP1-201ENST00000444815 1067 ntBASIC17.02■□□□□ 0.32
SRFP11831 AC106886.1-201ENST00000568660 600 ntBASIC17.02■□□□□ 0.32
SRFP11831 AC105021.1-202ENST00000570572 669 ntBASIC17.02■□□□□ 0.32
SRFP11831 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.02■□□□□ 0.32
SRFP11831 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRFP11831 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.02■□□□□ 0.32
SRFP11831 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.02■□□□□ 0.32
SRFP11831 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRFP11831 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SRFP11831 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRFP11831 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRFP11831 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
SRFP11831 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 AC133963.1-201ENST00000504166 1679 ntBASIC17.01■□□□□ 0.31
SRFP11831 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRFP11831 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 AC079776.1-201ENST00000401540 1152 ntBASIC17.01■□□□□ 0.31
SRFP11831 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.01■□□□□ 0.31
SRFP11831 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.01■□□□□ 0.31
SRFP11831 AC093004.1-201ENST00000508850 424 ntBASIC17.01■□□□□ 0.31
SRFP11831 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.01■□□□□ 0.31
SRFP11831 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 AL079307.3-201ENST00000556114 283 ntBASIC17.01■□□□□ 0.31
SRFP11831 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 AC132938.2-201ENST00000579188 680 ntBASIC17.01■□□□□ 0.31
SRFP11831 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.01■□□□□ 0.31
SRFP11831 AL591163.1-201ENST00000641757 987 ntBASIC17.01■□□□□ 0.31
SRFP11831 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SRFP11831 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRFP11831 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRFP11831 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17■□□□□ 0.31
SRFP11831 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SRFP11831 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SRFP11831 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17■□□□□ 0.31
SRFP11831 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SRFP11831 AL080243.2-201ENST00000418783 582 ntBASIC17■□□□□ 0.31
SRFP11831 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17■□□□□ 0.31
SRFP11831 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SRFP11831 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17■□□□□ 0.31
SRFP11831 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17■□□□□ 0.31
SRFP11831 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17■□□□□ 0.31
SRFP11831 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17■□□□□ 0.31
SRFP11831 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17■□□□□ 0.31
SRFP11831 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17■□□□□ 0.31
SRFP11831 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SRFP11831 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SRFP11831 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17■□□□□ 0.31
SRFP11831 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRFP11831 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRFP11831 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRFP11831 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.99■□□□□ 0.31
SRFP11831 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SRFP11831 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms