Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL662799.1-202ENST00000614205 422 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 AC025048.6-201ENST00000634326 1161 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC6P09630 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC6P09630 AC133963.1-201ENST00000504166 1679 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 AC068880.1-201ENST00000507289 2297 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC6P09630 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.06■□□□□ 0.64
HOXC6P09630 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.06■□□□□ 0.64
HOXC6P09630 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 AC020763.4-201ENST00000623414 4170 ntBASIC19.06■□□□□ 0.64
HOXC6P09630 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HOXC6P09630 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HOXC6P09630 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
HOXC6P09630 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC6P09630 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC6P09630 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.06■□□□□ 0.64
HOXC6P09630 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 AC018529.1-201ENST00000613063 361 ntBASIC19.06■□□□□ 0.64
HOXC6P09630 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC6P09630 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
HOXC6P09630 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 AC105233.2-201ENST00000523697 349 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 AC027369.6-201ENST00000525520 931 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 AF228730.5-201ENST00000530288 346 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXC6P09630 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 RARRES2P9-201ENST00000565168 469 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 AC134043.2-201ENST00000624206 2238 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC6P09630 AC131009.4-201ENST00000624048 1740 ntBASIC19.05■□□□□ 0.64
HOXC6P09630 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXC6P09630 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC6P09630 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXC6P09630 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC6P09630 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC6P09630 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 NME2P1-201ENST00000426182 414 ntBASIC19.04■□□□□ 0.64
HOXC6P09630 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HOXC6P09630 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC6P09630 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC6P09630 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC6P09630 AL596325.1-201ENST00000563991 1082 ntBASIC19.04■□□□□ 0.64
HOXC6P09630 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC6P09630 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 AC007967.4-201ENST00000614700 386 ntBASIC19.04■□□□□ 0.64
HOXC6P09630 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms