Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.5■□□□□ 0.07
P04436 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 HTR5BP-201ENST00000430851 1154 ntBASIC15.5■□□□□ 0.07
P04436 MKNK2P1-201ENST00000437526 628 ntBASIC15.5■□□□□ 0.07
P04436 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
P04436 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.5■□□□□ 0.07
P04436 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.5■□□□□ 0.07
P04436 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.5■□□□□ 0.07
P04436 AL031432.2-201ENST00000566714 459 ntBASIC15.5■□□□□ 0.07
P04436 AL928711.1-201ENST00000570165 459 ntBASIC15.5■□□□□ 0.07
P04436 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.5■□□□□ 0.07
P04436 AL078644.1-201ENST00000609881 752 ntBASIC15.5■□□□□ 0.07
P04436 REXO1L3P-201ENST00000622202 1288 ntBASIC15.5■□□□□ 0.07
P04436 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
P04436 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 LINC02012-201ENST00000608206 1725 ntBASIC15.5■□□□□ 0.07
P04436 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
P04436 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 AL023806.1-201ENST00000603994 1649 ntBASIC15.5■□□□□ 0.07
P04436 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.5■□□□□ 0.07
P04436 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
P04436 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
P04436 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
P04436 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
P04436 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
P04436 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.49■□□□□ 0.07
P04436 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 FRMD8P1-201ENST00000440433 1524 ntBASIC15.49■□□□□ 0.07
P04436 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
P04436 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 AL353732.1-201ENST00000569618 1459 ntBASIC15.49■□□□□ 0.07
P04436 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.49■□□□□ 0.07
P04436 AC211486.1-202ENST00000416371 468 ntBASIC15.49■□□□□ 0.07
P04436 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.49■□□□□ 0.07
P04436 AC211476.1-201ENST00000503899 468 ntBASIC15.49■□□□□ 0.07
P04436 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
P04436 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.49■□□□□ 0.07
P04436 MIR4515-201ENST00000584082 81 ntBASIC15.49■□□□□ 0.07
P04436 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.49■□□□□ 0.07
P04436 AC055717.3-201ENST00000622967 595 ntBASIC15.49■□□□□ 0.07
P04436 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
P04436 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 TOP3BP1-201ENST00000420768 1380 ntBASIC15.49■□□□□ 0.07
P04436 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04436 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.48■□□□□ 0.07
P04436 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.48■□□□□ 0.07
P04436 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
P04436 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.48■□□□□ 0.07
P04436 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.48■□□□□ 0.07
P04436 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.48■□□□□ 0.07
P04436 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
P04436 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04436 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.48■□□□□ 0.07
P04436 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.48■□□□□ 0.07
P04436 RPS8P6-201ENST00000426177 609 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms