Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
MBD4O95243 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD4O95243 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 AC134684.3-201ENST00000641758 218 ntBASIC20.21■□□□□ 0.83
MBD4O95243 AC092902.6-201ENST00000641783 218 ntBASIC20.21■□□□□ 0.83
MBD4O95243 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MBD4O95243 AC131009.4-201ENST00000624048 1740 ntBASIC20.21■□□□□ 0.83
MBD4O95243 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 TUBB8P12-201ENST00000308911 1335 ntBASIC20.21■□□□□ 0.83
MBD4O95243 TUBB7P-202ENST00000428444 1305 ntBASIC20.21■□□□□ 0.83
MBD4O95243 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD4O95243 TUBB8P7-204ENST00000567960 1332 ntBASIC20.21■□□□□ 0.83
MBD4O95243 PCDHB17P-201ENST00000539533 2393 ntBASIC20.21■□□□□ 0.83
MBD4O95243 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MBD4O95243 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD4O95243 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 AC026471.1-201ENST00000564629 3026 ntBASIC20.2■□□□□ 0.82
MBD4O95243 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MBD4O95243 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
MBD4O95243 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MBD4O95243 HCG4-201ENST00000418983 998 ntBASIC20.2■□□□□ 0.82
MBD4O95243 MKNK2P1-201ENST00000437526 628 ntBASIC20.2■□□□□ 0.82
MBD4O95243 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MBD4O95243 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.2■□□□□ 0.82
MBD4O95243 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.2■□□□□ 0.82
MBD4O95243 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD4O95243 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD4O95243 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD4O95243 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MBD4O95243 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD4O95243 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 AC140658.5-201ENST00000438532 169 ntBASIC20.19■□□□□ 0.82
MBD4O95243 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.19■□□□□ 0.82
MBD4O95243 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD4O95243 AC004967.1-201ENST00000453589 447 ntBASIC20.19■□□□□ 0.82
MBD4O95243 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD4O95243 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
MBD4O95243 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
MBD4O95243 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.19■□□□□ 0.82
MBD4O95243 AC087641.1-201ENST00000557561 1021 ntBASIC20.19■□□□□ 0.82
MBD4O95243 MIR4492-201ENST00000581627 80 ntBASIC20.19■□□□□ 0.82
MBD4O95243 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.19■□□□□ 0.82
MBD4O95243 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.19■□□□□ 0.82
MBD4O95243 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD4O95243 ELL2P1-201ENST00000413990 1906 ntBASIC20.19■□□□□ 0.82
MBD4O95243 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
MBD4O95243 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD4O95243 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
MBD4O95243 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD4O95243 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD4O95243 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MBD4O95243 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.18■□□□□ 0.82
MBD4O95243 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 AC211486.1-202ENST00000416371 468 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms