Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 AP001160.2-201ENST00000596071 487 ntBASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBAL3A6NHL2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AC073621.1-201ENST00000392730 636 ntBASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
TUBAL3A6NHL2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 FLJ13224-201ENST00000313737 1514 ntBASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
TUBAL3A6NHL2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 AC116407.2-201ENST00000613639 860 ntBASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 UBALD1-205ENST00000590891 2641 ntBASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBAL3A6NHL2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 AC105020.1-201ENST00000435356 2205 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms