Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 IGLL3P-201ENST00000412472 434 ntBASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 AP000344.2-201ENST00000512987 629 ntBASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 GMCL1P1-201ENST00000463439 1581 ntBASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF3Q9NR81 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 AC010507.1-201ENST00000633895 436 ntBASIC18.02■□□□□ 0.48
ARHGEF3Q9NR81 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 PCDH8P1-201ENST00000428983 2773 ntBASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF3Q9NR81 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 COX5BP2-201ENST00000392354 334 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 MRPL20P1-201ENST00000400819 433 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC244107.1-201ENST00000442033 332 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 ACTG1P14-201ENST00000446382 1122 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 COX20P2-201ENST00000452636 358 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 AC004877.2-201ENST00000623941 599 ntBASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF3Q9NR81 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms