Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 AC092865.6-201ENST00000642101 219 ntBASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 FEM1AP3-201ENST00000403722 1741 ntBASIC25.51■■□□□ 1.67
SCAF1Q9H7N4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AC005052.1-201ENST00000625181 2492 ntBASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AC245100.3-201ENST00000441281 285 ntBASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TMF1P1-201ENST00000576058 373 ntBASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF1Q9H7N4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AGGF1P2-201ENST00000426656 2106 ntBASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 ABCD1P5-201ENST00000445663 754 ntBASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 INTS4P1-201ENST00000438455 1935 ntBASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF1Q9H7N4 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 ELL2P1-201ENST00000413990 1906 ntBASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 KRT8P2-201ENST00000556193 944 ntBASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AC005498.2-205ENST00000593218 784 ntBASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AC090950.1-202ENST00000605733 644 ntBASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms