Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC46Q96FV0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AC004706.3-202ENST00000621574 984 ntBASIC15.41■□□□□ 0.06
LRRC46Q96FV0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRRC46Q96FV0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AC211486.1-202ENST00000416371 468 ntBASIC15.4■□□□□ 0.06
LRRC46Q96FV0 RPS8P6-201ENST00000426177 609 ntBASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 DDX43P3-201ENST00000441064 443 ntBASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AC211476.1-201ENST00000503899 468 ntBASIC15.4■□□□□ 0.06
LRRC46Q96FV0 STK19B-204ENST00000512515 211 ntBASIC15.4■□□□□ 0.06
LRRC46Q96FV0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC46Q96FV0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC46Q96FV0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC46Q96FV0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC46Q96FV0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC46Q96FV0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC46Q96FV0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms