Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AC092053.1-201ENST00000605787 1936 ntBASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AL020989.1-201ENST00000422979 469 ntBASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AC124947.2-201ENST00000547118 1133 ntBASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AL591684.3-201ENST00000605187 298 ntBASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF439Q8NDP4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
ZNF439Q8NDP4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ZNF439Q8NDP4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ZNF439Q8NDP4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 NUS1P1-201ENST00000446295 882 ntBASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 SIGLEC30P-201ENST00000455569 941 ntBASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 AC079776.2-201ENST00000641154 1609 ntBASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF439Q8NDP4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms