Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 AC026471.1-201ENST00000564629 3026 ntBASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 PCDHB18P-201ENST00000524813 2368 ntBASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 MIR4453-201ENST00000584019 89 ntBASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 LETM1P2-201ENST00000597330 2178 ntBASIC21.15■□□□□ 0.98
CARMIL3Q8ND23 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 OR8S1-201ENST00000310194 1080 ntBASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.14■□□□□ 0.98
CARMIL3Q8ND23 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 EGFEM1P-202ENST00000431685 1563 ntBASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CARMIL3Q8ND23 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 RN7SL692P-201ENST00000464677 288 ntBASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 AL662799.1-202ENST00000614205 422 ntBASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 SPDYE12P-201ENST00000618416 771 ntBASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 AC073592.8-201ENST00000624126 511 ntBASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 AC100757.3-201ENST00000622361 1406 ntBASIC21.13■□□□□ 0.97
CARMIL3Q8ND23 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms