Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 MPDU1-223ENST00000582151 728 ntBASIC13.78□□□□□ -0.2
LINC00311Q8N616 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00311Q8N616 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00311Q8N616 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00311Q8N616 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00311Q8N616 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00311Q8N616 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00311Q8N616 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.77□□□□□ -0.2
LINC00311Q8N616 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
LINC00311Q8N616 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.77□□□□□ -0.21
LINC00311Q8N616 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AC093909.1-201ENST00000504731 1122 ntBASIC13.77□□□□□ -0.21
LINC00311Q8N616 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AL353732.1-201ENST00000569618 1459 ntBASIC13.77□□□□□ -0.21
LINC00311Q8N616 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 MIR4492-201ENST00000581627 80 ntBASIC13.77□□□□□ -0.21
LINC00311Q8N616 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 AP002414.3-201ENST00000589352 1468 ntBASIC13.77□□□□□ -0.21
LINC00311Q8N616 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00311Q8N616 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
LINC00311Q8N616 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms