Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PCDHA12-202ENST00000613593 2588 ntBASIC15.83■□□□□ 0.12
BEST3Q8N1M1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC092183.1-201ENST00000469884 875 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC004877.2-201ENST00000623941 599 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC134684.3-201ENST00000641758 218 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 BCAR1-209ENST00000546196 1340 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 TNRC18P3-201ENST00000441896 2691 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 AC133963.1-201ENST00000504166 1679 ntBASIC15.82■□□□□ 0.12
BEST3Q8N1M1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST3Q8N1M1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 ALG1L5P-201ENST00000482043 771 ntBASIC15.81■□□□□ 0.12
BEST3Q8N1M1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST3Q8N1M1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BEST3Q8N1M1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms