Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC005412.3-201ENST00000580309 715 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 REXO1L6P-201ENST00000603433 1515 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 SLC7A15P-201ENST00000424028 1363 ntBASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 INE1-201ENST00000456273 945 ntBASIC11.69□□□□□ -0.54
CSMD3Q7Z407 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 LINC00895-201ENST00000629028 1637 ntBASIC11.69□□□□□ -0.54
CSMD3Q7Z407 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AC073439.1-201ENST00000624121 1774 ntBASIC11.69□□□□□ -0.54
CSMD3Q7Z407 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.69□□□□□ -0.54
CSMD3Q7Z407 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 NEFHP1-201ENST00000412845 2629 ntBASIC11.68□□□□□ -0.54
CSMD3Q7Z407 AC092658.1-201ENST00000505836 891 ntBASIC11.68□□□□□ -0.54
CSMD3Q7Z407 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 AC087499.5-201ENST00000452760 1342 ntBASIC11.68□□□□□ -0.54
CSMD3Q7Z407 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 AL355994.2-201ENST00000447882 704 ntBASIC11.68□□□□□ -0.54
CSMD3Q7Z407 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 AC098614.1-201ENST00000368528 745 ntBASIC11.68□□□□□ -0.54
CSMD3Q7Z407 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CSMD3Q7Z407 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.67□□□□□ -0.54
CSMD3Q7Z407 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms