Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 RNPS1P1-201ENST00000507437 918 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 AC112698.1-201ENST00000510299 916 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 MIR7706-201ENST00000613747 67 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 AL118508.1-201ENST00000613502 2345 ntBASIC11.34□□□□□ -0.59
SCXQ7RTU7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.33□□□□□ -0.59
SCXQ7RTU7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
SCXQ7RTU7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.33□□□□□ -0.59
SCXQ7RTU7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SCXQ7RTU7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC243591.1-201ENST00000452967 1364 ntBASIC11.33□□□□□ -0.6
SCXQ7RTU7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AL049840.3-201ENST00000602669 611 ntBASIC11.33□□□□□ -0.6
SCXQ7RTU7 AL671883.3-201ENST00000603274 991 ntBASIC11.33□□□□□ -0.6
SCXQ7RTU7 GPALPP1-207ENST00000611650 899 ntBASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SCXQ7RTU7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.33□□□□□ -0.6
SCXQ7RTU7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms