Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 RNA5SP415-201ENST00000517246 115 ntBASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 AC106730.1-201ENST00000566722 1090 ntBASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 AC008667.4-201ENST00000607370 168 ntBASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 GGTLC5P-201ENST00000617623 998 ntBASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC39BQ5VTQ0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AL590787.1-201ENST00000568856 1315 ntBASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 UNC93B6-202ENST00000528242 690 ntBASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AC106886.4-201ENST00000623557 2502 ntBASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC39BQ5VTQ0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 AC104109.2-201ENST00000602919 1418 ntBASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 PMS2P1-201ENST00000431037 1228 ntBASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 IGHV3-65-201ENST00000523210 341 ntBASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TTC39BQ5VTQ0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms