Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC068408.1-201ENST00000577406 1144 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 MIR4259-201ENST00000584466 101 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.92■□□□□ 0.3
NUBP1P53384 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC16.92■□□□□ 0.3
NUBP1P53384 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.92■□□□□ 0.3
NUBP1P53384 AC004918.3-201ENST00000602609 925 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 TMEM261P1-201ENST00000604899 340 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 AC008494.3-201ENST00000606615 944 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 MIR6869-201ENST00000619434 62 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.92■□□□□ 0.3
NUBP1P53384 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NUBP1P53384 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
NUBP1P53384 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
NUBP1P53384 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 RN7SL837P-201ENST00000463010 287 ntBASIC16.91■□□□□ 0.3
NUBP1P53384 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.91■□□□□ 0.3
NUBP1P53384 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.91■□□□□ 0.3
NUBP1P53384 AC073389.1-201ENST00000595595 795 ntBASIC16.91■□□□□ 0.3
NUBP1P53384 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NUBP1P53384 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NUBP1P53384 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NUBP1P53384 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NUBP1P53384 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUBP1P53384 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
NUBP1P53384 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 RNU1-129P-201ENST00000384064 167 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.9■□□□□ 0.3
NUBP1P53384 OR51A6P-201ENST00000418680 1004 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC16.9■□□□□ 0.3
NUBP1P53384 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 DOC2GP-202ENST00000514950 1163 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC16.9■□□□□ 0.3
NUBP1P53384 U1.21-201ENST00000580816 167 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.9■□□□□ 0.3
NUBP1P53384 AL031055.1-201ENST00000606362 631 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 AL359742.1-201ENST00000622497 540 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.9■□□□□ 0.3
NUBP1P53384 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC16.9■□□□□ 0.3
NUBP1P53384 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms