Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCNKBP51801 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCNKBP51801 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCNKBP51801 TFAMP1-201ENST00000412727 736 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 TSEN15P1-201ENST00000423257 515 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 SPDYE11-202ENST00000450699 704 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCNKBP51801 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCNKBP51801 FAM86C2P-203ENST00000528684 1004 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCNKBP51801 AC087641.1-201ENST00000557561 1021 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 SPDYE9P-201ENST00000570642 692 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 AL355385.1-201ENST00000606123 409 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 SPDYE10P-202ENST00000612005 668 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 SPDYE8P-202ENST00000612377 668 ntBASIC18.09■□□□□ 0.49
CLCNKBP51801 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCNKBP51801 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCNKBP51801 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCNKBP51801 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKBP51801 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKBP51801 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCNKBP51801 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CLCNKBP51801 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.08■□□□□ 0.49
CLCNKBP51801 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCNKBP51801 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKBP51801 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKBP51801 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKBP51801 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.08■□□□□ 0.48
CLCNKBP51801 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.08■□□□□ 0.48
CLCNKBP51801 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.08■□□□□ 0.48
CLCNKBP51801 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.08■□□□□ 0.48
CLCNKBP51801 RARRES2P8-201ENST00000566335 367 ntBASIC18.08■□□□□ 0.48
CLCNKBP51801 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.08■□□□□ 0.48
CLCNKBP51801 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKBP51801 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CLCNKBP51801 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.08■□□□□ 0.48
CLCNKBP51801 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKBP51801 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKBP51801 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLCNKBP51801 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLCNKBP51801 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCNKBP51801 AC092474.2-201ENST00000424288 719 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 AC079140.1-201ENST00000508039 487 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 RFPL4AP1-201ENST00000530883 850 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCNKBP51801 AC243562.1-201ENST00000560672 389 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 AC093520.2-201ENST00000561830 333 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 AL135744.1-201ENST00000565098 629 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCNKBP51801 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCNKBP51801 AL161645.1-201ENST00000622716 1255 ntBASIC18.07■□□□□ 0.48
CLCNKBP51801 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLCNKBP51801 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKBP51801 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms