Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.16■□□□□ 0.82
TNNI2P48788 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.16■□□□□ 0.82
TNNI2P48788 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TNNI2P48788 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
TNNI2P48788 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.15■□□□□ 0.82
TNNI2P48788 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.15■□□□□ 0.82
TNNI2P48788 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.15■□□□□ 0.82
TNNI2P48788 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TNNI2P48788 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.15■□□□□ 0.82
TNNI2P48788 LINC01225-203ENST00000563550 1244 ntBASIC20.15■□□□□ 0.82
TNNI2P48788 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.15■□□□□ 0.82
TNNI2P48788 AC140878.1-201ENST00000565277 250 ntBASIC20.15■□□□□ 0.82
TNNI2P48788 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TNNI2P48788 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TNNI2P48788 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.15■□□□□ 0.82
TNNI2P48788 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNNI2P48788 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.15■□□□□ 0.82
TNNI2P48788 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TNNI2P48788 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TNNI2P48788 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.15■□□□□ 0.82
TNNI2P48788 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TNNI2P48788 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNNI2P48788 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TNNI2P48788 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.14■□□□□ 0.81
TNNI2P48788 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 WASH6P-202ENST00000359512 1437 ntBASIC20.14■□□□□ 0.81
TNNI2P48788 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.14■□□□□ 0.81
TNNI2P48788 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.14■□□□□ 0.81
TNNI2P48788 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.14■□□□□ 0.81
TNNI2P48788 AC026150.2-201ENST00000564693 1156 ntBASIC20.14■□□□□ 0.81
TNNI2P48788 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.14■□□□□ 0.81
TNNI2P48788 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.14■□□□□ 0.81
TNNI2P48788 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 AC084121.4-201ENST00000641598 221 ntBASIC20.14■□□□□ 0.81
TNNI2P48788 AF228730.8-201ENST00000642140 221 ntBASIC20.14■□□□□ 0.81
TNNI2P48788 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
TNNI2P48788 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNNI2P48788 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.14■□□□□ 0.81
TNNI2P48788 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.13■□□□□ 0.81
TNNI2P48788 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.13■□□□□ 0.81
TNNI2P48788 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.13■□□□□ 0.81
TNNI2P48788 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TNNI2P48788 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.13■□□□□ 0.81
TNNI2P48788 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.13■□□□□ 0.81
TNNI2P48788 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TNNI2P48788 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.13■□□□□ 0.81
TNNI2P48788 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNNI2P48788 AC134043.2-201ENST00000624206 2238 ntBASIC20.12■□□□□ 0.81
TNNI2P48788 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNNI2P48788 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TNNI2P48788 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNNI2P48788 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.12■□□□□ 0.81
TNNI2P48788 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNNI2P48788 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNNI2P48788 NOC2LP2-201ENST00000407594 1944 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms