Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
RFC4P35249 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 AL353779.1-201ENST00000434793 351 ntBASIC21.19■□□□□ 0.98
RFC4P35249 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 IGHV3-71-201ENST00000523324 359 ntBASIC21.19■□□□□ 0.98
RFC4P35249 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.19■□□□□ 0.98
RFC4P35249 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.19■□□□□ 0.98
RFC4P35249 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 AC087499.5-201ENST00000452760 1342 ntBASIC21.19■□□□□ 0.98
RFC4P35249 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC4P35249 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.19■□□□□ 0.98
RFC4P35249 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 AC138969.3-201ENST00000546612 1459 ntBASIC21.19■□□□□ 0.98
RFC4P35249 AC138932.2-201ENST00000548268 1459 ntBASIC21.19■□□□□ 0.98
RFC4P35249 AC126755.4-201ENST00000549796 1459 ntBASIC21.19■□□□□ 0.98
RFC4P35249 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RFC4P35249 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 API5-211ENST00000534695 560 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.18■□□□□ 0.98
RFC4P35249 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.18■□□□□ 0.98
RFC4P35249 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.18■□□□□ 0.98
RFC4P35249 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 CYP2A7P1-201ENST00000595391 815 ntBASIC21.18■□□□□ 0.98
RFC4P35249 LINC00896-202ENST00000609602 2128 ntBASIC21.18■□□□□ 0.98
RFC4P35249 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 TEX28P1-201ENST00000613479 1221 ntBASIC21.18■□□□□ 0.98
RFC4P35249 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.18■□□□□ 0.98
RFC4P35249 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 TEX28P2-201ENST00000617764 1221 ntBASIC21.18■□□□□ 0.98
RFC4P35249 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RFC4P35249 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RFC4P35249 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC4P35249 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 AC104581.1-202ENST00000635932 2618 ntBASIC21.18■□□□□ 0.98
RFC4P35249 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFC4P35249 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC4P35249 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RFC4P35249 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 AC012317.2-201ENST00000623305 2251 ntBASIC21.17■□□□□ 0.98
RFC4P35249 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RFC4P35249 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 HLA-H-201ENST00000383620 1096 ntBASIC21.17■□□□□ 0.98
RFC4P35249 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.17■□□□□ 0.98
RFC4P35249 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.17■□□□□ 0.98
RFC4P35249 AL353705.2-201ENST00000428243 662 ntBASIC21.17■□□□□ 0.98
RFC4P35249 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 AC140912.1-201ENST00000577171 1054 ntBASIC21.17■□□□□ 0.98
RFC4P35249 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.17■□□□□ 0.98
RFC4P35249 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC4P35249 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 BX323043.1-201ENST00000641006 1765 ntBASIC21.17■□□□□ 0.98
RFC4P35249 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RFC4P35249 TNXA-203ENST00000507684 2038 ntBASIC21.17■□□□□ 0.98
RFC4P35249 AL355312.1-201ENST00000407115 2176 ntBASIC21.17■□□□□ 0.98
RFC4P35249 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC4P35249 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RFC4P35249 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC4P35249 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms