Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CFTRP13569 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC28.66■■■□□ 2.18
CFTRP13569 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC28.66■■■□□ 2.18
CFTRP13569 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC28.66■■■□□ 2.18
CFTRP13569 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC28.66■■■□□ 2.18
CFTRP13569 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC28.66■■■□□ 2.18
CFTRP13569 KRT8P12-202ENST00000472924 1397 ntBASIC28.66■■■□□ 2.18
CFTRP13569 AL021920.2-201ENST00000624828 1351 ntBASIC28.66■■■□□ 2.18
CFTRP13569 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC28.66■■■□□ 2.18
CFTRP13569 AC116353.5-201ENST00000638148 1699 ntBASIC28.66■■■□□ 2.18
CFTRP13569 AC093525.9-201ENST00000624961 1746 ntBASIC28.66■■■□□ 2.18
CFTRP13569 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
CFTRP13569 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
CFTRP13569 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC28.66■■■□□ 2.18
CFTRP13569 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC28.66■■■□□ 2.18
CFTRP13569 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CFTRP13569 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC28.66■■■□□ 2.18
CFTRP13569 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC28.66■■■□□ 2.18
CFTRP13569 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC28.66■■■□□ 2.18
CFTRP13569 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CFTRP13569 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
CFTRP13569 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 MPV17-208ENST00000405076 603 ntTSL 5 BASIC28.65■■■□□ 2.18
CFTRP13569 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC28.65■■■□□ 2.18
CFTRP13569 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC28.65■■■□□ 2.18
CFTRP13569 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC28.65■■■□□ 2.18
CFTRP13569 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
CFTRP13569 AC092337.1-201ENST00000568699 1129 ntBASIC28.65■■■□□ 2.18
CFTRP13569 MIR6775-201ENST00000617557 69 ntBASIC28.65■■■□□ 2.18
CFTRP13569 AC004461.2-201ENST00000629517 803 ntBASIC28.65■■■□□ 2.18
CFTRP13569 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CFTRP13569 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC28.64■■■□□ 2.18
CFTRP13569 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CFTRP13569 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.64■■■□□ 2.18
CFTRP13569 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CFTRP13569 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CFTRP13569 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC28.64■■■□□ 2.18
CFTRP13569 NME9-203ENST00000383180 2133 ntTSL 2 BASIC28.64■■■□□ 2.18
CFTRP13569 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CFTRP13569 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CFTRP13569 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
CFTRP13569 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC28.64■■■□□ 2.17
CFTRP13569 SERBP1P3-201ENST00000459980 809 ntBASIC28.64■■■□□ 2.17
CFTRP13569 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CFTRP13569 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC28.64■■■□□ 2.17
CFTRP13569 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
CFTRP13569 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC28.63■■■□□ 2.17
CFTRP13569 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
CFTRP13569 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC28.63■■■□□ 2.17
CFTRP13569 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC28.63■■■□□ 2.17
CFTRP13569 AC092552.1-201ENST00000547243 906 ntBASIC28.63■■■□□ 2.17
CFTRP13569 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC28.63■■■□□ 2.17
CFTRP13569 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CFTRP13569 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CFTRP13569 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CFTRP13569 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
CFTRP13569 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CFTRP13569 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC28.62■■■□□ 2.17
CFTRP13569 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
CFTRP13569 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CFTRP13569 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC28.62■■■□□ 2.17
CFTRP13569 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC28.62■■■□□ 2.17
CFTRP13569 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CFTRP13569 MYCLP2-201ENST00000449268 967 ntBASIC28.62■■■□□ 2.17
CFTRP13569 AC007389.4-201ENST00000454674 793 ntBASIC28.62■■■□□ 2.17
CFTRP13569 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CFTRP13569 USP32P1-208ENST00000506594 1164 ntBASIC28.62■■■□□ 2.17
CFTRP13569 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC28.62■■■□□ 2.17
CFTRP13569 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC28.62■■■□□ 2.17
CFTRP13569 TPRX2P-201ENST00000535362 881 ntBASIC28.62■■■□□ 2.17
CFTRP13569 AC123567.1-201ENST00000548294 1261 ntBASIC28.62■■■□□ 2.17
CFTRP13569 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC28.62■■■□□ 2.17
CFTRP13569 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC28.62■■■□□ 2.17
CFTRP13569 WFDC1-204ENST00000613603 549 ntBASIC28.62■■■□□ 2.17
CFTRP13569 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC28.62■■■□□ 2.17
CFTRP13569 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CFTRP13569 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CFTRP13569 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CFTRP13569 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC28.61■■■□□ 2.17
CFTRP13569 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms