Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC29.32■■■□□ 2.28
TOP2AP11388 BTBD7P1-201ENST00000447253 1453 ntBASIC29.32■■■□□ 2.28
TOP2AP11388 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC29.32■■■□□ 2.28
TOP2AP11388 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
TOP2AP11388 LINC02012-201ENST00000608206 1725 ntBASIC29.32■■■□□ 2.28
TOP2AP11388 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
TOP2AP11388 PGF-202ENST00000405431 666 ntTSL 5 BASIC29.31■■■□□ 2.28
TOP2AP11388 KRT17P7-201ENST00000451704 1104 ntBASIC29.31■■■□□ 2.28
TOP2AP11388 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC29.31■■■□□ 2.28
TOP2AP11388 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
TOP2AP11388 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC29.31■■■□□ 2.28
TOP2AP11388 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TOP2AP11388 GNE-204ENST00000539208 2190 ntTSL 2 BASIC29.31■■■□□ 2.28
TOP2AP11388 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 DFFBP1-201ENST00000433250 979 ntBASIC29.3■■■□□ 2.28
TOP2AP11388 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC29.3■■■□□ 2.28
TOP2AP11388 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
TOP2AP11388 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC29.3■■■□□ 2.28
TOP2AP11388 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 RBM39-205ENST00000397370 612 ntTSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TOP2AP11388 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC29.3■■■□□ 2.28
TOP2AP11388 AL359881.2-201ENST00000602973 570 ntBASIC29.3■■■□□ 2.28
TOP2AP11388 AL008721.1-201ENST00000609964 604 ntBASIC29.3■■■□□ 2.28
TOP2AP11388 AL671710.1-201ENST00000610245 2349 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 AC138969.3-201ENST00000546612 1459 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 AC138932.2-201ENST00000548268 1459 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 AC126755.4-201ENST00000549796 1459 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC29.29■■■□□ 2.28
TOP2AP11388 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 IGHV3-71-201ENST00000523324 359 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 HILS1-202ENST00000545329 423 ntBASIC29.29■■■□□ 2.28
TOP2AP11388 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC29.29■■■□□ 2.28
TOP2AP11388 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC29.29■■■□□ 2.28
TOP2AP11388 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC29.29■■■□□ 2.28
TOP2AP11388 FHL2-212ENST00000607522 759 ntTSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC29.29■■■□□ 2.28
TOP2AP11388 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC29.29■■■□□ 2.28
TOP2AP11388 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC29.29■■■□□ 2.28
TOP2AP11388 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TOP2AP11388 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TOP2AP11388 CD276-201ENST00000318424 2738 ntTSL 5 BASIC29.28■■■□□ 2.28
TOP2AP11388 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
TOP2AP11388 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC29.28■■■□□ 2.28
TOP2AP11388 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC29.28■■■□□ 2.28
TOP2AP11388 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TOP2AP11388 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC29.28■■■□□ 2.28
TOP2AP11388 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC29.28■■■□□ 2.28
TOP2AP11388 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC29.28■■■□□ 2.28
TOP2AP11388 GIMAP3P-201ENST00000495150 836 ntBASIC29.28■■■□□ 2.28
TOP2AP11388 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TOP2AP11388 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC29.28■■■□□ 2.28
TOP2AP11388 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC29.28■■■□□ 2.28
TOP2AP11388 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC29.28■■■□□ 2.28
TOP2AP11388 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TOP2AP11388 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TOP2AP11388 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC29.28■■■□□ 2.28
TOP2AP11388 RHBDF1P1-201ENST00000427504 1941 ntBASIC29.27■■■□□ 2.28
TOP2AP11388 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
TOP2AP11388 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
TOP2AP11388 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC29.27■■■□□ 2.28
TOP2AP11388 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TOP2AP11388 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
TOP2AP11388 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TOP2AP11388 AC135586.1-201ENST00000539323 574 ntBASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms