Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC093028.1-201ENST00000622998 982 ntBASIC19.06■□□□□ 0.64
GGPS1O95749 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 PRORSD1P-202ENST00000563365 2154 ntBASIC19.06■□□□□ 0.64
GGPS1O95749 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.06■□□□□ 0.64
GGPS1O95749 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GGPS1O95749 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.05■□□□□ 0.64
GGPS1O95749 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.05■□□□□ 0.64
GGPS1O95749 AC026120.1-201ENST00000611536 926 ntBASIC19.05■□□□□ 0.64
GGPS1O95749 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.05■□□□□ 0.64
GGPS1O95749 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GGPS1O95749 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
GGPS1O95749 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.05■□□□□ 0.64
GGPS1O95749 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GGPS1O95749 AC012569.1-201ENST00000591191 1524 ntBASIC19.05■□□□□ 0.64
GGPS1O95749 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
GGPS1O95749 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.04■□□□□ 0.64
GGPS1O95749 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.04■□□□□ 0.64
GGPS1O95749 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.04■□□□□ 0.64
GGPS1O95749 KRT8P48-201ENST00000515599 1220 ntBASIC19.04■□□□□ 0.64
GGPS1O95749 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.04■□□□□ 0.64
GGPS1O95749 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.04■□□□□ 0.64
GGPS1O95749 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.04■□□□□ 0.64
GGPS1O95749 AC106028.4-201ENST00000614509 607 ntBASIC19.04■□□□□ 0.64
GGPS1O95749 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.04■□□□□ 0.64
GGPS1O95749 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GGPS1O95749 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.04■□□□□ 0.64
GGPS1O95749 AC116353.5-201ENST00000638148 1699 ntBASIC19.04■□□□□ 0.64
GGPS1O95749 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.04■□□□□ 0.64
GGPS1O95749 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.04■□□□□ 0.64
GGPS1O95749 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GGPS1O95749 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 AL353732.1-201ENST00000569618 1459 ntBASIC19.03■□□□□ 0.64
GGPS1O95749 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.03■□□□□ 0.64
GGPS1O95749 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.03■□□□□ 0.64
GGPS1O95749 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GGPS1O95749 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.03■□□□□ 0.64
GGPS1O95749 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.03■□□□□ 0.64
GGPS1O95749 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.03■□□□□ 0.64
GGPS1O95749 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GGPS1O95749 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GGPS1O95749 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.03■□□□□ 0.64
GGPS1O95749 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GGPS1O95749 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GGPS1O95749 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms