Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF4O60810 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 KRT126P-201ENST00000549467 1181 ntBASIC16.37■□□□□ 0.21
PRAMEF4O60810 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 REXO1L3P-201ENST00000622202 1288 ntBASIC16.37■□□□□ 0.21
PRAMEF4O60810 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF4O60810 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF4O60810 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF4O60810 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEF4O60810 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEF4O60810 KRT8P49-201ENST00000604166 1432 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AP002414.3-201ENST00000589352 1468 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AL391256.1-201ENST00000443260 1855 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 KRT18P67-201ENST00000432816 1264 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 AC073648.2-201ENST00000510116 352 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AC006557.2-201ENST00000592985 1240 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AL049840.3-201ENST00000602669 611 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 AC008735.5-201ENST00000623544 497 ntBASIC16.36■□□□□ 0.21
PRAMEF4O60810 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF4O60810 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF4O60810 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 HLA-A-202ENST00000376806 1854 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 RPS15P9-201ENST00000494093 319 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 RNA5SP419-201ENST00000515908 135 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 AP002469.2-201ENST00000531724 424 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 FAM215A-202ENST00000632077 792 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 PI4KAP1-204ENST00000612579 1703 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 PCDHB19P-201ENST00000570871 2371 ntBASIC16.35■□□□□ 0.21
PRAMEF4O60810 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF4O60810 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF4O60810 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms