Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 RPL28-204ENST00000431533 590 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.27■■□□□ 1.32
CHD2O14647 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CHD2O14647 AC123567.1-201ENST00000548294 1261 ntBASIC23.27■■□□□ 1.32
CHD2O14647 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CHD2O14647 RPL28-206ENST00000558752 671 ntTSL 3 BASIC23.27■■□□□ 1.32
CHD2O14647 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CHD2O14647 WFDC1-204ENST00000613603 549 ntBASIC23.27■■□□□ 1.32
CHD2O14647 AC004461.2-201ENST00000629517 803 ntBASIC23.27■■□□□ 1.32
CHD2O14647 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD2O14647 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD2O14647 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD2O14647 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
CHD2O14647 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CHD2O14647 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CHD2O14647 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD2O14647 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CHD2O14647 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 AC133963.1-201ENST00000504166 1679 ntBASIC23.26■■□□□ 1.31
CHD2O14647 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD2O14647 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CHD2O14647 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC23.26■■□□□ 1.31
CHD2O14647 AC092337.1-201ENST00000568699 1129 ntBASIC23.26■■□□□ 1.31
CHD2O14647 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD2O14647 AC090164.3-201ENST00000610780 2143 ntBASIC23.26■■□□□ 1.31
CHD2O14647 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD2O14647 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD2O14647 AL355312.1-201ENST00000407115 2176 ntBASIC23.25■■□□□ 1.31
CHD2O14647 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 NME9-203ENST00000383180 2133 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD2O14647 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD2O14647 FHL2-212ENST00000607522 759 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD2O14647 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD2O14647 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD2O14647 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD2O14647 NOC2LP1-202ENST00000452600 2235 ntBASIC23.25■■□□□ 1.31
CHD2O14647 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CHD2O14647 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CHD2O14647 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD2O14647 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD2O14647 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CHD2O14647 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD2O14647 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.24■■□□□ 1.31
CHD2O14647 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD2O14647 AC061975.2-201ENST00000581722 295 ntBASIC23.24■■□□□ 1.31
CHD2O14647 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD2O14647 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD2O14647 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CHD2O14647 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CHD2O14647 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD2O14647 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 FAM8A2P-201ENST00000528813 1142 ntBASIC23.24■■□□□ 1.31
CHD2O14647 NAA38-207ENST00000576861 556 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 MIR4538-201ENST00000581377 78 ntBASIC23.24■■□□□ 1.31
CHD2O14647 AC084346.2-201ENST00000607097 949 ntBASIC23.24■■□□□ 1.31
CHD2O14647 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.24■■□□□ 1.31
CHD2O14647 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD2O14647 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD2O14647 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD2O14647 IMPDH1P4-201ENST00000445028 1534 ntBASIC23.24■■□□□ 1.31
CHD2O14647 AL133338.1-201ENST00000565695 1517 ntBASIC23.24■■□□□ 1.31
CHD2O14647 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 BX323043.1-201ENST00000641006 1765 ntBASIC23.23■■□□□ 1.31
CHD2O14647 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD2O14647 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD2O14647 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHD2O14647 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC23.23■■□□□ 1.31
CHD2O14647 AC004945.1-201ENST00000416738 983 ntBASIC23.23■■□□□ 1.31
CHD2O14647 BCYRN1-201ENST00000418539 200 ntBASIC23.23■■□□□ 1.31
CHD2O14647 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CHD2O14647 MYCLP2-201ENST00000449268 967 ntBASIC23.23■■□□□ 1.31
CHD2O14647 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD2O14647 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.23■■□□□ 1.31
CHD2O14647 TEX48-202ENST00000612244 662 ntTSL 3 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms