Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 IGHGP-201ENST00000390555 1178 ntBASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 UPK3BP1-201ENST00000428678 509 ntBASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 AC113404.2-201ENST00000507884 177 ntBASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 AC069148.1-201ENST00000608741 768 ntBASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HCC1Q9Y3T6 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 GUSBP12-201ENST00000513727 720 ntBASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 KRT8P26-201ENST00000534154 1276 ntBASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 AC144831.1-201ENST00000573312 2656 ntBASIC19.59■□□□□ 0.73
R3HCC1Q9Y3T6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 AL353692.3-201ENST00000407031 1396 ntBASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 AC092068.3-201ENST00000587894 2016 ntBASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 AC005915.1-201ENST00000624912 2018 ntBASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HCC1Q9Y3T6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 AC093458.2-201ENST00000623150 629 ntBASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.58■□□□□ 0.72
R3HCC1Q9Y3T6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms