Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTN4Q9NQC3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AP000593.1-201ENST00000393668 712 ntBASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AL023284.2-201ENST00000405850 579 ntBASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AC128676.1-201ENST00000454392 318 ntBASIC20.22■□□□□ 0.83
RTN4Q9NQC3 C1QBPP2-201ENST00000528754 825 ntBASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 AP000692.2-201ENST00000608391 879 ntBASIC20.22■□□□□ 0.83
RTN4Q9NQC3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.22■□□□□ 0.83
RTN4Q9NQC3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 COA4-204ENST00000541455 1038 ntTSL 5 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 RARRES2P10-201ENST00000564312 460 ntBASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 CICP20-201ENST00000443330 2801 ntBASIC20.21■□□□□ 0.83
RTN4Q9NQC3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTN4Q9NQC3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 KRT8P50-201ENST00000562022 1438 ntBASIC20.2■□□□□ 0.82
RTN4Q9NQC3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms