Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 COX5BP2-201ENST00000392354 334 ntBASIC11.35□□□□□ -0.59
LITAFQ99732 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC11.35□□□□□ -0.59
LITAFQ99732 FAM197Y1-201ENST00000421178 764 ntBASIC11.35□□□□□ -0.59
LITAFQ99732 SLC25A1P2-201ENST00000430693 912 ntBASIC11.35□□□□□ -0.59
LITAFQ99732 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC11.34□□□□□ -0.59
LITAFQ99732 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
LITAFQ99732 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.34□□□□□ -0.59
LITAFQ99732 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 CICP13-201ENST00000422015 2789 ntBASIC11.34□□□□□ -0.59
LITAFQ99732 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 AC006449.6-201ENST00000612330 2296 ntBASIC11.34□□□□□ -0.59
LITAFQ99732 LINC00895-201ENST00000629028 1637 ntBASIC11.34□□□□□ -0.59
LITAFQ99732 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.34□□□□□ -0.59
LITAFQ99732 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
LITAFQ99732 AC092338.2-201ENST00000568827 1415 ntBASIC11.34□□□□□ -0.59
LITAFQ99732 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LITAFQ99732 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LITAFQ99732 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
LITAFQ99732 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LITAFQ99732 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LITAFQ99732 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.33□□□□□ -0.6
LITAFQ99732 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LITAFQ99732 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms