Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TTC28Q96AY4 RN7SL828P-201ENST00000607615 303 ntBASIC17.02■□□□□ 0.32
TTC28Q96AY4 KRT8P12-202ENST00000472924 1397 ntBASIC17.02■□□□□ 0.32
TTC28Q96AY4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC28Q96AY4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TTC28Q96AY4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC28Q96AY4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 MAGEA5-201ENST00000446757 942 ntBASIC17.02■□□□□ 0.31
TTC28Q96AY4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TTC28Q96AY4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TTC28Q96AY4 HLA-C-210ENST00000640219 976 ntBASIC17.02■□□□□ 0.31
TTC28Q96AY4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AL607033.1-201ENST00000623900 1599 ntBASIC17.01■□□□□ 0.31
TTC28Q96AY4 SLC22A20-204ENST00000530038 1673 ntBASIC17.01■□□□□ 0.31
TTC28Q96AY4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 MIR326-201ENST00000362220 95 ntBASIC17.01■□□□□ 0.31
TTC28Q96AY4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AC007969.1-201ENST00000433675 447 ntBASIC17.01■□□□□ 0.31
TTC28Q96AY4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC28Q96AY4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC28Q96AY4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TTC28Q96AY4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17■□□□□ 0.31
TTC28Q96AY4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17■□□□□ 0.31
TTC28Q96AY4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TTC28Q96AY4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TTC28Q96AY4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17■□□□□ 0.31
TTC28Q96AY4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17■□□□□ 0.31
TTC28Q96AY4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TTC28Q96AY4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17■□□□□ 0.31
TTC28Q96AY4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17■□□□□ 0.31
TTC28Q96AY4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17■□□□□ 0.31
TTC28Q96AY4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17■□□□□ 0.31
TTC28Q96AY4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17■□□□□ 0.31
TTC28Q96AY4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC28Q96AY4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 AL627389.1-201ENST00000413508 1182 ntBASIC16.99■□□□□ 0.31
TTC28Q96AY4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC28Q96AY4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TTC28Q96AY4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms